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Cluster: HRGMv2_2302_CGC152

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_112 HRGMv2_2302_112_4 1778 3121 - 2.A.66.1.32
CAZyme HRGMv2_2302_112 HRGMv2_2302_112_5 3381 4559 + GH88
NULL(UNKNOWN) HRGMv2_2302_112 HRGMv2_2302_112_6 4698 5015 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2302_112 HRGMv2_2302_112_7 5388 7670 + HTH_AraC
TC HRGMv2_2302_112 HRGMv2_2302_112_8 7890 9578 + 3.A.1.1.10
TC HRGMv2_2302_112 HRGMv2_2302_112_9 9667 10587 + 3.A.1.1.10
TC HRGMv2_2302_112 HRGMv2_2302_112_10 10600 11478 + 3.A.1.1.10
CAZyme HRGMv2_2302_112 HRGMv2_2302_112_11 11571 13505 + GH129
Gene ID: HRGMv2_2302_112_4
Type: TC
Location: 1778 - 3121 (-)
Gene ID: HRGMv2_2302_112_5
Type: CAZyme
Location: 3381 - 4559 (+)
Gene ID: HRGMv2_2302_112_6
Type:
Location: 4698 - 5015 (+)
Gene ID: HRGMv2_2302_112_7
Type: TF
Location: 5388 - 7670 (+)
Gene ID: HRGMv2_2302_112_8
Type: TC
Location: 7890 - 9578 (+)
Gene ID: HRGMv2_2302_112_9
Type: TC
Location: 9667 - 10587 (+)
Gene ID: HRGMv2_2302_112_10
Type: TC
Location: 10600 - 11478 (+)
Gene ID: HRGMv2_2302_112_11
Type: CAZyme
Location: 11571 - 13505 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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