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Cluster: HRGMv2_2302_CGC146

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_101 HRGMv2_2302_101_1 1 147 - 3.A.1.29.1
TC HRGMv2_2302_101 HRGMv2_2302_101_2 390 944 - 3.A.1.29.1
TF HRGMv2_2302_101 HRGMv2_2302_101_3 1149 2744 - HTH_AraC | HTH_AraC
pfam HRGMv2_2302_101 HRGMv2_2302_101_4 2837 3793 - URO-D
TC HRGMv2_2302_101 HRGMv2_2302_101_5 3863 5605 - 8.A.59.2.1
TC HRGMv2_2302_101 HRGMv2_2302_101_6 5663 6643 - 8.A.5.1.4
TC HRGMv2_2302_101 HRGMv2_2302_101_7 6658 7491 - 3.A.1.1.34
TC HRGMv2_2302_101 HRGMv2_2302_101_8 7504 8412 - 3.A.1.1.20
TC HRGMv2_2302_101 HRGMv2_2302_101_9 8507 9883 - 3.A.1.1.40
TF HRGMv2_2302_101 HRGMv2_2302_101_10 10119 11198 - LacI
CAZyme HRGMv2_2302_101 HRGMv2_2302_101_11 11200 13923 - CBM67 | GH78
Gene ID: HRGMv2_2302_101_1
Type: TC
Location: 1 - 147 (-)
Gene ID: HRGMv2_2302_101_2
Type: TC
Location: 390 - 944 (-)
Gene ID: HRGMv2_2302_101_3
Type: TF
Location: 1149 - 2744 (-)
Gene ID: HRGMv2_2302_101_4
Type: pfam
Location: 2837 - 3793 (-)
Gene ID: HRGMv2_2302_101_5
Type: TC
Location: 3863 - 5605 (-)
Gene ID: HRGMv2_2302_101_6
Type: TC
Location: 5663 - 6643 (-)
Gene ID: HRGMv2_2302_101_7
Type: TC
Location: 6658 - 7491 (-)
Gene ID: HRGMv2_2302_101_8
Type: TC
Location: 7504 - 8412 (-)
Gene ID: HRGMv2_2302_101_9
Type: TC
Location: 8507 - 9883 (-)
Gene ID: HRGMv2_2302_101_10
Type: TF
Location: 10119 - 11198 (-)
Gene ID: HRGMv2_2302_101_11
Type: CAZyme
Location: 11200 - 13923 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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