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Cluster: HRGMv2_2302_CGC145

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_98 HRGMv2_2302_98_9 8738 10228 - GH51_1
CAZyme HRGMv2_2302_98 HRGMv2_2302_98_10 10304 11254 - GH43_26
pfam HRGMv2_2302_98 HRGMv2_2302_98_11 11652 12518 - Acetyltransf_1 | FR47
pfam HRGMv2_2302_98 HRGMv2_2302_98_12 12655 15195 - FtsX | FtsX | MacB_PCD
TC HRGMv2_2302_98 HRGMv2_2302_98_13 15195 15881 - 3.A.1.125.3
pfam HRGMv2_2302_98 HRGMv2_2302_98_14 16024 16452 - Glyoxalase_6
NULL(UNKNOWN) HRGMv2_2302_98 HRGMv2_2302_98_15 16575 18161 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_98 HRGMv2_2302_98_16 18277 19623 - 2.A.66.1.32
TC HRGMv2_2302_98 HRGMv2_2302_98_17 19913 21316 + 2.A.66.1.32
Gene ID: HRGMv2_2302_98_9
Type: CAZyme
Location: 8738 - 10228 (-)
Gene ID: HRGMv2_2302_98_10
Type: CAZyme
Location: 10304 - 11254 (-)
Gene ID: HRGMv2_2302_98_11
Type: pfam
Location: 11652 - 12518 (-)
Gene ID: HRGMv2_2302_98_12
Type: pfam
Location: 12655 - 15195 (-)
Gene ID: HRGMv2_2302_98_13
Type: TC
Location: 15195 - 15881 (-)
Gene ID: HRGMv2_2302_98_14
Type: pfam
Location: 16024 - 16452 (-)
Gene ID: HRGMv2_2302_98_15
Type:
Location: 16575 - 18161 (-)
Gene ID: HRGMv2_2302_98_16
Type: TC
Location: 18277 - 19623 (-)
Gene ID: HRGMv2_2302_98_17
Type: TC
Location: 19913 - 21316 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_2302_98_9 vegetarian > omnivore 1.06504 0.01548

🧭 Explore Read Mapping of CGC

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