dbCAN Logo

Cluster: HRGMv2_2302_CGC144

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_96 HRGMv2_2302_96_1 13 1947 - GH2
CAZyme HRGMv2_2302_96 HRGMv2_2302_96_2 2054 3970 - GH13_31
TC HRGMv2_2302_96 HRGMv2_2302_96_3 3974 5359 - 2.A.2.2.1
TC HRGMv2_2302_96 HRGMv2_2302_96_4 5603 6943 - 1.B.52.2.2
TF HRGMv2_2302_96 HRGMv2_2302_96_5 7220 7744 - PadR
TC HRGMv2_2302_96 HRGMv2_2302_96_6 7923 9302 + 2.A.66.1.32
STP HRGMv2_2302_96 HRGMv2_2302_96_7 9393 10748 + B12-binding
pfam HRGMv2_2302_96 HRGMv2_2302_96_8 10943 14257 + MGS | ATP-grasp | ATP-grasp | CPSase_L_D2 | CPSase_L_D2 | CPSase_L_D3 | Dala_Dala_lig_C | Dala_Dala_lig_C
CAZyme HRGMv2_2302_96 HRGMv2_2302_96_9 14394 16586 - GH106
TC HRGMv2_2302_96 HRGMv2_2302_96_10 16677 18596 - 9.B.34.1.2
Gene ID: HRGMv2_2302_96_1
Type: CAZyme
Location: 13 - 1947 (-)
Gene ID: HRGMv2_2302_96_2
Type: CAZyme
Location: 2054 - 3970 (-)
Gene ID: HRGMv2_2302_96_3
Type: TC
Location: 3974 - 5359 (-)
Gene ID: HRGMv2_2302_96_4
Type: TC
Location: 5603 - 6943 (-)
Gene ID: HRGMv2_2302_96_5
Type: TF
Location: 7220 - 7744 (-)
Gene ID: HRGMv2_2302_96_6
Type: TC
Location: 7923 - 9302 (+)
Gene ID: HRGMv2_2302_96_7
Type: STP
Location: 9393 - 10748 (+)
Gene ID: HRGMv2_2302_96_8
Type: pfam
Location: 10943 - 14257 (+)
Gene ID: HRGMv2_2302_96_9
Type: CAZyme
Location: 14394 - 16586 (-)
Gene ID: HRGMv2_2302_96_10
Type: TC
Location: 16677 - 18596 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List