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Cluster: HRGMv2_2302_CGC138

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_1 232 1647 + GH43_35
sulfatase HRGMv2_2302_87 HRGMv2_2302_87_2 1665 2768 + S1_19
TF HRGMv2_2302_87 HRGMv2_2302_87_3 3095 4150 + LacI
TC HRGMv2_2302_87 HRGMv2_2302_87_4 4678 5598 + 3.A.1.1.10
TC HRGMv2_2302_87 HRGMv2_2302_87_5 5619 6542 + 3.A.1.1.29
STP HRGMv2_2302_87 HRGMv2_2302_87_6 6677 8476 + SBP_bac_1
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_7 8631 11618 + GH10
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_8 11695 13209 + CBM91 | GH43_10
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_9 13274 14785 + GH51_1
peptidase HRGMv2_2302_87 HRGMv2_2302_87_10 14848 16377 + S09.UPW
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_11 16406 18406 + GH31_4
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_12 18507 20231 + GH43_27
peptidase HRGMv2_2302_87 HRGMv2_2302_87_13 20355 21536 + S12.UPW
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_14 21594 23111 + GH39
CAZyme HRGMv2_2302_87 HRGMv2_2302_87_15 23176 25647 + GH51_2
Gene ID: HRGMv2_2302_87_1
Type: CAZyme
Location: 232 - 1647 (+)
Gene ID: HRGMv2_2302_87_2
Type: sulfatase
Location: 1665 - 2768 (+)
Gene ID: HRGMv2_2302_87_3
Type: TF
Location: 3095 - 4150 (+)
Gene ID: HRGMv2_2302_87_4
Type: TC
Location: 4678 - 5598 (+)
Gene ID: HRGMv2_2302_87_5
Type: TC
Location: 5619 - 6542 (+)
Gene ID: HRGMv2_2302_87_6
Type: STP
Location: 6677 - 8476 (+)
Gene ID: HRGMv2_2302_87_7
Type: CAZyme
Location: 8631 - 11618 (+)
Gene ID: HRGMv2_2302_87_8
Type: CAZyme
Location: 11695 - 13209 (+)
Gene ID: HRGMv2_2302_87_9
Type: CAZyme
Location: 13274 - 14785 (+)
Gene ID: HRGMv2_2302_87_10
Type: peptidase
Location: 14848 - 16377 (+)
Gene ID: HRGMv2_2302_87_11
Type: CAZyme
Location: 16406 - 18406 (+)
Gene ID: HRGMv2_2302_87_12
Type: CAZyme
Location: 18507 - 20231 (+)
Gene ID: HRGMv2_2302_87_13
Type: peptidase
Location: 20355 - 21536 (+)
Gene ID: HRGMv2_2302_87_14
Type: CAZyme
Location: 21594 - 23111 (+)
Gene ID: HRGMv2_2302_87_15
Type: CAZyme
Location: 23176 - 25647 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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