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Cluster: HRGMv2_2302_CGC137

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_86 HRGMv2_2302_86_14 14819 15862 - GH177
pfam HRGMv2_2302_86 HRGMv2_2302_86_15 16224 17432 + ROK | HTH_24
CAZyme HRGMv2_2302_86 HRGMv2_2302_86_16 17515 18600 + GH179
TF HRGMv2_2302_86 HRGMv2_2302_86_17 18733 19278 - SpoVT_AbrB
TF HRGMv2_2302_86 HRGMv2_2302_86_18 19393 21072 + HTH_AraC | HTH_AraC
TC HRGMv2_2302_86 HRGMv2_2302_86_19 21088 22911 + 8.A.59.2.1
pfam HRGMv2_2302_86 HRGMv2_2302_86_20 23014 23775 - PHP
NULL(UNKNOWN) HRGMv2_2302_86 HRGMv2_2302_86_21 23789 25564 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_86 HRGMv2_2302_86_22 25607 26533 - 3.A.1.1.29
Gene ID: HRGMv2_2302_86_14
Type: CAZyme
Location: 14819 - 15862 (-)
Gene ID: HRGMv2_2302_86_15
Type: pfam
Location: 16224 - 17432 (+)
Gene ID: HRGMv2_2302_86_16
Type: CAZyme
Location: 17515 - 18600 (+)
Gene ID: HRGMv2_2302_86_17
Type: TF
Location: 18733 - 19278 (-)
Gene ID: HRGMv2_2302_86_18
Type: TF
Location: 19393 - 21072 (+)
Gene ID: HRGMv2_2302_86_19
Type: TC
Location: 21088 - 22911 (+)
Gene ID: HRGMv2_2302_86_20
Type: pfam
Location: 23014 - 23775 (-)
Gene ID: HRGMv2_2302_86_21
Type:
Location: 23789 - 25564 (-)
Gene ID: HRGMv2_2302_86_22
Type: TC
Location: 25607 - 26533 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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