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Cluster: HRGMv2_2302_CGC131

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_81 HRGMv2_2302_81_8 8509 10329 + 8.A.59.2.1
STP HRGMv2_2302_81 HRGMv2_2302_81_9 10482 11873 + SBP_bac_1
TC HRGMv2_2302_81 HRGMv2_2302_81_10 11962 12873 + 3.A.1.1.35
TC HRGMv2_2302_81 HRGMv2_2302_81_11 12873 13721 + 3.A.1.1.11
CAZyme HRGMv2_2302_81 HRGMv2_2302_81_12 13758 15659 + GH127
pfam HRGMv2_2302_81 HRGMv2_2302_81_13 15872 16759 + DegV
STP HRGMv2_2302_81 HRGMv2_2302_81_14 17105 18475 + SBP_bac_1
TC HRGMv2_2302_81 HRGMv2_2302_81_15 18634 19503 + 3.A.1.1.41
TC HRGMv2_2302_81 HRGMv2_2302_81_16 19521 20309 + 3.A.1.1.20
pfam HRGMv2_2302_81 HRGMv2_2302_81_17 20331 21872 + ADP_ribosyl_GH
TF HRGMv2_2302_81 HRGMv2_2302_81_18 21927 23396 - HTH_AraC
TC HRGMv2_2302_81 HRGMv2_2302_81_19 23650 25284 + 3.A.1.135.5
Gene ID: HRGMv2_2302_81_8
Type: TC
Location: 8509 - 10329 (+)
Gene ID: HRGMv2_2302_81_9
Type: STP
Location: 10482 - 11873 (+)
Gene ID: HRGMv2_2302_81_10
Type: TC
Location: 11962 - 12873 (+)
Gene ID: HRGMv2_2302_81_11
Type: TC
Location: 12873 - 13721 (+)
Gene ID: HRGMv2_2302_81_12
Type: CAZyme
Location: 13758 - 15659 (+)
Gene ID: HRGMv2_2302_81_13
Type: pfam
Location: 15872 - 16759 (+)
Gene ID: HRGMv2_2302_81_14
Type: STP
Location: 17105 - 18475 (+)
Gene ID: HRGMv2_2302_81_15
Type: TC
Location: 18634 - 19503 (+)
Gene ID: HRGMv2_2302_81_16
Type: TC
Location: 19521 - 20309 (+)
Gene ID: HRGMv2_2302_81_17
Type: pfam
Location: 20331 - 21872 (+)
Gene ID: HRGMv2_2302_81_18
Type: TF
Location: 21927 - 23396 (-)
Gene ID: HRGMv2_2302_81_19
Type: TC
Location: 23650 - 25284 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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