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Cluster: HRGMv2_2302_CGC129

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_78 HRGMv2_2302_78_3 1484 2242 + 8.A.59.4.1
TC HRGMv2_2302_78 HRGMv2_2302_78_4 2211 3560 + 8.A.59.4.2
sulfatase HRGMv2_2302_78 HRGMv2_2302_78_5 3810 5669 + S1_97
TF HRGMv2_2302_78 HRGMv2_2302_78_6 5866 7038 + HTH_AraC | HTH_AraC
TC HRGMv2_2302_78 HRGMv2_2302_78_7 7035 8741 + 8.A.59.2.1
NULL(UNKNOWN) HRGMv2_2302_78 HRGMv2_2302_78_8 8926 10722 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_78 HRGMv2_2302_78_9 10793 11701 + 3.A.1.1.29
TC HRGMv2_2302_78 HRGMv2_2302_78_10 11745 12647 + 3.A.1.1.29
CAZyme HRGMv2_2302_78 HRGMv2_2302_78_11 12724 14172 + GH29
TC HRGMv2_2302_78 HRGMv2_2302_78_12 14284 16434 - 4.A.3.2.6
TF HRGMv2_2302_78 HRGMv2_2302_78_13 16567 17373 - HTH_AraC | HTH_AraC
CAZyme HRGMv2_2302_78 HRGMv2_2302_78_14 17527 19536 + GH42
Gene ID: HRGMv2_2302_78_3
Type: TC
Location: 1484 - 2242 (+)
Gene ID: HRGMv2_2302_78_4
Type: TC
Location: 2211 - 3560 (+)
Gene ID: HRGMv2_2302_78_5
Type: sulfatase
Location: 3810 - 5669 (+)
Gene ID: HRGMv2_2302_78_6
Type: TF
Location: 5866 - 7038 (+)
Gene ID: HRGMv2_2302_78_7
Type: TC
Location: 7035 - 8741 (+)
Gene ID: HRGMv2_2302_78_8
Type:
Location: 8926 - 10722 (+)
Gene ID: HRGMv2_2302_78_9
Type: TC
Location: 10793 - 11701 (+)
Gene ID: HRGMv2_2302_78_10
Type: TC
Location: 11745 - 12647 (+)
Gene ID: HRGMv2_2302_78_11
Type: CAZyme
Location: 12724 - 14172 (+)
Gene ID: HRGMv2_2302_78_12
Type: TC
Location: 14284 - 16434 (-)
Gene ID: HRGMv2_2302_78_13
Type: TF
Location: 16567 - 17373 (-)
Gene ID: HRGMv2_2302_78_14
Type: CAZyme
Location: 17527 - 19536 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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