Cluster: HRGMv2_2302_CGC125
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2302
- CGC Family ID: CGCFAM_02495
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2302_73 | HRGMv2_2302_73_13 | 12200 | 14065 | + | GH5_19 |
| TF | HRGMv2_2302_73 | HRGMv2_2302_73_14 | 14266 | 16512 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2302_73 | HRGMv2_2302_73_15 | 16760 | 17686 | + | 3.A.1.1.10 |
| TC | HRGMv2_2302_73 | HRGMv2_2302_73_16 | 17699 | 18589 | + | 3.A.1.1.29 |
| pfam | HRGMv2_2302_73 | HRGMv2_2302_73_17 | 18645 | 20228 | + | SBP_bac_1 | DUF3502 |
| CAZyme | HRGMv2_2302_73 | HRGMv2_2302_73_18 | 20329 | 21420 | + | GH179 |
Gene ID: HRGMv2_2302_73_13
Type: CAZyme
Location: 12200 - 14065 (+)
Type: CAZyme
Location: 12200 - 14065 (+)
Gene ID: HRGMv2_2302_73_14
Type: TF
Location: 14266 - 16512 (+)
Type: TF
Location: 14266 - 16512 (+)
Gene ID: HRGMv2_2302_73_15
Type: TC
Location: 16760 - 17686 (+)
Type: TC
Location: 16760 - 17686 (+)
Gene ID: HRGMv2_2302_73_16
Type: TC
Location: 17699 - 18589 (+)
Type: TC
Location: 17699 - 18589 (+)
Gene ID: HRGMv2_2302_73_17
Type: pfam
Location: 18645 - 20228 (+)
Type: pfam
Location: 18645 - 20228 (+)
Gene ID: HRGMv2_2302_73_18
Type: CAZyme
Location: 20329 - 21420 (+)
Type: CAZyme
Location: 20329 - 21420 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Eisenbergiella
Species
Eisenbergiella sp003478085
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.