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Cluster: HRGMv2_2302_CGC122

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_71 HRGMv2_2302_71_14 14801 16807 + 2.A.66.1.32
TC HRGMv2_2302_71 HRGMv2_2302_71_15 17232 18197 + 3.A.1.1.10
TC HRGMv2_2302_71 HRGMv2_2302_71_16 18215 19108 + 3.A.1.1.10
TC HRGMv2_2302_71 HRGMv2_2302_71_17 19222 20823 + 3.A.1.1.10
TF HRGMv2_2302_71 HRGMv2_2302_71_18 20950 23151 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_2302_71 HRGMv2_2302_71_19 23166 24869 + GH2
CAZyme HRGMv2_2302_71 HRGMv2_2302_71_20 24879 25742 + CE4
NULL(UNKNOWN) HRGMv2_2302_71 HRGMv2_2302_71_21 25748 26641 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_2302_71 HRGMv2_2302_71_22 26822 28219 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_71 HRGMv2_2302_71_23 28304 30160 - 1.E.43.3.3
Gene ID: HRGMv2_2302_71_14
Type: TC
Location: 14801 - 16807 (+)
Gene ID: HRGMv2_2302_71_15
Type: TC
Location: 17232 - 18197 (+)
Gene ID: HRGMv2_2302_71_16
Type: TC
Location: 18215 - 19108 (+)
Gene ID: HRGMv2_2302_71_17
Type: TC
Location: 19222 - 20823 (+)
Gene ID: HRGMv2_2302_71_18
Type: TF
Location: 20950 - 23151 (+)
Gene ID: HRGMv2_2302_71_19
Type: CAZyme
Location: 23166 - 24869 (+)
Gene ID: HRGMv2_2302_71_20
Type: CAZyme
Location: 24879 - 25742 (+)
Gene ID: HRGMv2_2302_71_21
Type:
Location: 25748 - 26641 (+)
Gene ID: HRGMv2_2302_71_22
Type:
Location: 26822 - 28219 (-)
Gene ID: HRGMv2_2302_71_23
Type: TC
Location: 28304 - 30160 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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