dbCAN Logo

Cluster: HRGMv2_2302_CGC116

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_62 HRGMv2_2302_62_9 10402 12768 - GH3
pfam HRGMv2_2302_62 HRGMv2_2302_62_10 12819 13883 - Lactonase
TF HRGMv2_2302_62 HRGMv2_2302_62_11 14117 14656 + HTH_3
TC HRGMv2_2302_62 HRGMv2_2302_62_12 14721 15794 + 3.A.1.11.8
TC HRGMv2_2302_62 HRGMv2_2302_62_13 15787 16611 + 3.A.1.11.8
TC HRGMv2_2302_62 HRGMv2_2302_62_14 16608 17405 + 3.A.1.11.1
TC HRGMv2_2302_62 HRGMv2_2302_62_15 17441 18502 + 3.A.1.11.7
pfam HRGMv2_2302_62 HRGMv2_2302_62_16 18602 19255 - PG_binding_1
TC HRGMv2_2302_62 HRGMv2_2302_62_17 19347 20051 - 3.A.1.122.14
NULL(UNKNOWN) HRGMv2_2302_62 HRGMv2_2302_62_18 20101 20676 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2302_62 HRGMv2_2302_62_19 20690 22018 - 3.A.1.122.12
Gene ID: HRGMv2_2302_62_9
Type: CAZyme
Location: 10402 - 12768 (-)
Gene ID: HRGMv2_2302_62_10
Type: pfam
Location: 12819 - 13883 (-)
Gene ID: HRGMv2_2302_62_11
Type: TF
Location: 14117 - 14656 (+)
Gene ID: HRGMv2_2302_62_12
Type: TC
Location: 14721 - 15794 (+)
Gene ID: HRGMv2_2302_62_13
Type: TC
Location: 15787 - 16611 (+)
Gene ID: HRGMv2_2302_62_14
Type: TC
Location: 16608 - 17405 (+)
Gene ID: HRGMv2_2302_62_15
Type: TC
Location: 17441 - 18502 (+)
Gene ID: HRGMv2_2302_62_16
Type: pfam
Location: 18602 - 19255 (-)
Gene ID: HRGMv2_2302_62_17
Type: TC
Location: 19347 - 20051 (-)
Gene ID: HRGMv2_2302_62_18
Type:
Location: 20101 - 20676 (-)
Gene ID: HRGMv2_2302_62_19
Type: TC
Location: 20690 - 22018 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List