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Cluster: HRGMv2_2302_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_2 HRGMv2_2302_2_52 65069 66409 - 2.A.66.1.13
STP HRGMv2_2302_2 HRGMv2_2302_2_53 66523 67161 + cNMP_binding
CAZyme HRGMv2_2302_2 HRGMv2_2302_2_54 67128 68057 - GH43_24
CAZyme HRGMv2_2302_2 HRGMv2_2302_2_55 68118 69281 - GH88
TF HRGMv2_2302_2 HRGMv2_2302_2_56 69284 70807 - 0035607 | 0036286
TC HRGMv2_2302_2 HRGMv2_2302_2_57 70782 72689 - 8.A.59.2.1
TC HRGMv2_2302_2 HRGMv2_2302_2_58 72843 73685 - 3.A.1.1.45
TC HRGMv2_2302_2 HRGMv2_2302_2_59 73682 74572 - 3.A.1.1.28
Gene ID: HRGMv2_2302_2_52
Type: TC
Location: 65069 - 66409 (-)
Gene ID: HRGMv2_2302_2_53
Type: STP
Location: 66523 - 67161 (+)
Gene ID: HRGMv2_2302_2_54
Type: CAZyme
Location: 67128 - 68057 (-)
Gene ID: HRGMv2_2302_2_55
Type: CAZyme
Location: 68118 - 69281 (-)
Gene ID: HRGMv2_2302_2_56
Type: TF
Location: 69284 - 70807 (-)
Gene ID: HRGMv2_2302_2_57
Type: TC
Location: 70782 - 72689 (-)
Gene ID: HRGMv2_2302_2_58
Type: TC
Location: 72843 - 73685 (-)
Gene ID: HRGMv2_2302_2_59
Type: TC
Location: 73682 - 74572 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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