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Cluster: HRGMv2_2302_CGC105

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2302_54 HRGMv2_2302_54_1 186 1988 + 9.B.33.1.1
TF HRGMv2_2302_54 HRGMv2_2302_54_2 2069 3682 + HTH_AraC
TC HRGMv2_2302_54 HRGMv2_2302_54_3 3923 5638 + 3.A.1.1.29
TC HRGMv2_2302_54 HRGMv2_2302_54_4 5726 6670 + 3.A.1.1.29
TC HRGMv2_2302_54 HRGMv2_2302_54_5 6686 7609 + 3.A.1.1.29
CAZyme HRGMv2_2302_54 HRGMv2_2302_54_6 7723 8895 + GH8
TC HRGMv2_2302_54 HRGMv2_2302_54_7 8941 10194 - 2.A.37.3.3
Gene ID: HRGMv2_2302_54_1
Type: TC
Location: 186 - 1988 (+)
Gene ID: HRGMv2_2302_54_2
Type: TF
Location: 2069 - 3682 (+)
Gene ID: HRGMv2_2302_54_3
Type: TC
Location: 3923 - 5638 (+)
Gene ID: HRGMv2_2302_54_4
Type: TC
Location: 5726 - 6670 (+)
Gene ID: HRGMv2_2302_54_5
Type: TC
Location: 6686 - 7609 (+)
Gene ID: HRGMv2_2302_54_6
Type: CAZyme
Location: 7723 - 8895 (+)
Gene ID: HRGMv2_2302_54_7
Type: TC
Location: 8941 - 10194 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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