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Cluster: HRGMv2_2302_CGC102

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2302_51 HRGMv2_2302_51_19 19965 21092 - GT4
pfam HRGMv2_2302_51 HRGMv2_2302_51_20 21152 22132 - ATP-grasp_3 | Dala_Dala_lig_C | RimK | ATPgrasp_Ter | PylC-like_N
TC HRGMv2_2302_51 HRGMv2_2302_51_21 22144 22779 - 9.B.18.1.2
STP HRGMv2_2302_51 HRGMv2_2302_51_22 22825 23961 - Aminotran_1_2
pfam HRGMv2_2302_51 HRGMv2_2302_51_23 24012 24398 - Glyoxalase | Glyoxalase_4
TC HRGMv2_2302_51 HRGMv2_2302_51_24 24457 26340 - 9.B.18.2.1
NULL(UNKNOWN) HRGMv2_2302_51 HRGMv2_2302_51_25 26330 28981 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_2302_51 HRGMv2_2302_51_26 29079 30950 - DUF6020
CAZyme HRGMv2_2302_51 HRGMv2_2302_51_27 30952 31911 - GT2
Gene ID: HRGMv2_2302_51_19
Type: CAZyme
Location: 19965 - 21092 (-)
Gene ID: HRGMv2_2302_51_20
Type: pfam
Location: 21152 - 22132 (-)
Gene ID: HRGMv2_2302_51_21
Type: TC
Location: 22144 - 22779 (-)
Gene ID: HRGMv2_2302_51_22
Type: STP
Location: 22825 - 23961 (-)
Gene ID: HRGMv2_2302_51_23
Type: pfam
Location: 24012 - 24398 (-)
Gene ID: HRGMv2_2302_51_24
Type: TC
Location: 24457 - 26340 (-)
Gene ID: HRGMv2_2302_51_25
Type:
Location: 26330 - 28981 (-)
Gene ID: HRGMv2_2302_51_26
Type: pfam
Location: 29079 - 30950 (-)
Gene ID: HRGMv2_2302_51_27
Type: CAZyme
Location: 30952 - 31911 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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