Cluster: HRGMv2_2290_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_10023
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_5 | HRGMv2_2290_5_23 | 33434 | 35404 | + | GH78 |
| TC | HRGMv2_2290_5 | HRGMv2_2290_5_24 | 35862 | 36782 | + | 3.A.1.1.28 |
| TC | HRGMv2_2290_5 | HRGMv2_2290_5_25 | 36794 | 37621 | + | 3.A.1.1.39 |
| CAZyme | HRGMv2_2290_5 | HRGMv2_2290_5_26 | 37724 | 39724 | + | GH151 |
Gene ID: HRGMv2_2290_5_23
Type: CAZyme
Location: 33434 - 35404 (+)
Type: CAZyme
Location: 33434 - 35404 (+)
Gene ID: HRGMv2_2290_5_24
Type: TC
Location: 35862 - 36782 (+)
Type: TC
Location: 35862 - 36782 (+)
Gene ID: HRGMv2_2290_5_25
Type: TC
Location: 36794 - 37621 (+)
Type: TC
Location: 36794 - 37621 (+)
Gene ID: HRGMv2_2290_5_26
Type: CAZyme
Location: 37724 - 39724 (+)
Type: CAZyme
Location: 37724 - 39724 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.