Cluster: HRGMv2_2290_CGC68
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_05143
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_191 | HRGMv2_2290_191_1 | 3 | 722 | + | GH28 |
| TC | HRGMv2_2290_191 | HRGMv2_2290_191_2 | 813 | 2159 | - | 2.A.23.1.5 |
| pfam | HRGMv2_2290_191 | HRGMv2_2290_191_3 | 2309 | 3148 | - | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd |
| TC | HRGMv2_2290_191 | HRGMv2_2290_191_4 | 3446 | 4294 | + | 2.A.119.2.2 |
Gene ID: HRGMv2_2290_191_1
Type: CAZyme
Location: 3 - 722 (+)
Type: CAZyme
Location: 3 - 722 (+)
Gene ID: HRGMv2_2290_191_2
Type: TC
Location: 813 - 2159 (-)
Type: TC
Location: 813 - 2159 (-)
Gene ID: HRGMv2_2290_191_3
Type: pfam
Location: 2309 - 3148 (-)
Type: pfam
Location: 2309 - 3148 (-)
Gene ID: HRGMv2_2290_191_4
Type: TC
Location: 3446 - 4294 (+)
Type: TC
Location: 3446 - 4294 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.