Cluster: HRGMv2_2290_CGC64
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00635
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_159 | HRGMv2_2290_159_1 | 34 | 3003 | - | GH106 |
| TF | HRGMv2_2290_159 | HRGMv2_2290_159_2 | 3211 | 4959 | - | HTH_AraC |
| TC | HRGMv2_2290_159 | HRGMv2_2290_159_3 | 4998 | 7073 | - | 9.B.33.1.1 |
Gene ID: HRGMv2_2290_159_1
Type: CAZyme
Location: 34 - 3003 (-)
Type: CAZyme
Location: 34 - 3003 (-)
Gene ID: HRGMv2_2290_159_2
Type: TF
Location: 3211 - 4959 (-)
Type: TF
Location: 3211 - 4959 (-)
Gene ID: HRGMv2_2290_159_3
Type: TC
Location: 4998 - 7073 (-)
Type: TC
Location: 4998 - 7073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.