Cluster: HRGMv2_2290_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_05314
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_4 | HRGMv2_2290_4_16 | 22314 | 27722 | - | GH136 |
| STP | HRGMv2_2290_4 | HRGMv2_2290_4_17 | 27802 | 29142 | - | SBP_bac_1 |
| TC | HRGMv2_2290_4 | HRGMv2_2290_4_18 | 29336 | 31246 | - | 8.A.59.2.1 |
| TC | HRGMv2_2290_4 | HRGMv2_2290_4_19 | 31563 | 32396 | - | 3.A.1.1.28 |
| TC | HRGMv2_2290_4 | HRGMv2_2290_4_20 | 32393 | 33304 | - | 3.A.1.1.42 |
Gene ID: HRGMv2_2290_4_16
Type: CAZyme
Location: 22314 - 27722 (-)
Type: CAZyme
Location: 22314 - 27722 (-)
Gene ID: HRGMv2_2290_4_17
Type: STP
Location: 27802 - 29142 (-)
Type: STP
Location: 27802 - 29142 (-)
Gene ID: HRGMv2_2290_4_18
Type: TC
Location: 29336 - 31246 (-)
Type: TC
Location: 29336 - 31246 (-)
Gene ID: HRGMv2_2290_4_19
Type: TC
Location: 31563 - 32396 (-)
Type: TC
Location: 31563 - 32396 (-)
Gene ID: HRGMv2_2290_4_20
Type: TC
Location: 32393 - 33304 (-)
Type: TC
Location: 32393 - 33304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.