Cluster: HRGMv2_2290_CGC58
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00026
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_129 | HRGMv2_2290_129_1 | 141 | 1337 | - | GH109 |
| CAZyme | HRGMv2_2290_129 | HRGMv2_2290_129_2 | 1366 | 2862 | - | GH136 |
| CAZyme | HRGMv2_2290_129 | HRGMv2_2290_129_3 | 2877 | 5648 | - | GH95 |
| STP | HRGMv2_2290_129 | HRGMv2_2290_129_4 | 5815 | 7500 | - | SBP_bac_1 |
| TC | HRGMv2_2290_129 | HRGMv2_2290_129_5 | 7586 | 8500 | - | 3.A.1.1.29 |
| TC | HRGMv2_2290_129 | HRGMv2_2290_129_6 | 8522 | 9457 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2290_129_1
Type: CAZyme
Location: 141 - 1337 (-)
Type: CAZyme
Location: 141 - 1337 (-)
Gene ID: HRGMv2_2290_129_2
Type: CAZyme
Location: 1366 - 2862 (-)
Type: CAZyme
Location: 1366 - 2862 (-)
Gene ID: HRGMv2_2290_129_3
Type: CAZyme
Location: 2877 - 5648 (-)
Type: CAZyme
Location: 2877 - 5648 (-)
Gene ID: HRGMv2_2290_129_4
Type: STP
Location: 5815 - 7500 (-)
Type: STP
Location: 5815 - 7500 (-)
Gene ID: HRGMv2_2290_129_5
Type: TC
Location: 7586 - 8500 (-)
Type: TC
Location: 7586 - 8500 (-)
Gene ID: HRGMv2_2290_129_6
Type: TC
Location: 8522 - 9457 (-)
Type: TC
Location: 8522 - 9457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.