Cluster: HRGMv2_2290_CGC53
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_03076
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_112 | HRGMv2_2290_112_3 | 2145 | 3914 | - | 3.A.1.135.5 |
| TC | HRGMv2_2290_112 | HRGMv2_2290_112_4 | 3999 | 5981 | - | 3.A.1.135.7 |
| TF | HRGMv2_2290_112 | HRGMv2_2290_112_5 | 5989 | 6426 | - | MarR |
| CAZyme | HRGMv2_2290_112 | HRGMv2_2290_112_6 | 6633 | 8351 | - | GH2 |
Gene ID: HRGMv2_2290_112_3
Type: TC
Location: 2145 - 3914 (-)
Type: TC
Location: 2145 - 3914 (-)
Gene ID: HRGMv2_2290_112_4
Type: TC
Location: 3999 - 5981 (-)
Type: TC
Location: 3999 - 5981 (-)
Gene ID: HRGMv2_2290_112_5
Type: TF
Location: 5989 - 6426 (-)
Type: TF
Location: 5989 - 6426 (-)
Gene ID: HRGMv2_2290_112_6
Type: CAZyme
Location: 6633 - 8351 (-)
Type: CAZyme
Location: 6633 - 8351 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.