Cluster: HRGMv2_2290_CGC51
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_01867
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_99 | HRGMv2_2290_99_5 | 5716 | 7386 | + | 3.A.1.1.10 |
| TC | HRGMv2_2290_99 | HRGMv2_2290_99_6 | 7406 | 8323 | + | 3.A.1.1.10 |
| TC | HRGMv2_2290_99 | HRGMv2_2290_99_7 | 8317 | 9219 | + | 3.A.1.1.10 |
| CAZyme | HRGMv2_2290_99 | HRGMv2_2290_99_8 | 9297 | 10502 | + | GH109 |
Gene ID: HRGMv2_2290_99_5
Type: TC
Location: 5716 - 7386 (+)
Type: TC
Location: 5716 - 7386 (+)
Gene ID: HRGMv2_2290_99_6
Type: TC
Location: 7406 - 8323 (+)
Type: TC
Location: 7406 - 8323 (+)
Gene ID: HRGMv2_2290_99_7
Type: TC
Location: 8317 - 9219 (+)
Type: TC
Location: 8317 - 9219 (+)
Gene ID: HRGMv2_2290_99_8
Type: CAZyme
Location: 9297 - 10502 (+)
Type: CAZyme
Location: 9297 - 10502 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.