Cluster: HRGMv2_2290_CGC49
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_93 | HRGMv2_2290_93_3 | 3943 | 6054 | - | 3.A.1.106.8 |
| TC | HRGMv2_2290_93 | HRGMv2_2290_93_4 | 6051 | 8030 | - | 3.A.1.106.8 |
| pfam | HRGMv2_2290_93 | HRGMv2_2290_93_5 | 8202 | 8459 | + | PhdYeFM_antitox |
| NULL(UNKNOWN) | HRGMv2_2290_93 | HRGMv2_2290_93_6 | 8452 | 8622 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2290_93 | HRGMv2_2290_93_7 | 8622 | 9290 | + | 9.B.20.1.4 |
| CAZyme | HRGMv2_2290_93 | HRGMv2_2290_93_8 | 9790 | 12984 | + | GH38 |
Gene ID: HRGMv2_2290_93_3
Type: TC
Location: 3943 - 6054 (-)
Type: TC
Location: 3943 - 6054 (-)
Gene ID: HRGMv2_2290_93_4
Type: TC
Location: 6051 - 8030 (-)
Type: TC
Location: 6051 - 8030 (-)
Gene ID: HRGMv2_2290_93_5
Type: pfam
Location: 8202 - 8459 (+)
Type: pfam
Location: 8202 - 8459 (+)
Gene ID: HRGMv2_2290_93_6
Type:
Location: 8452 - 8622 (+)
Type:
Location: 8452 - 8622 (+)
Gene ID: HRGMv2_2290_93_7
Type: TC
Location: 8622 - 9290 (+)
Type: TC
Location: 8622 - 9290 (+)
Gene ID: HRGMv2_2290_93_8
Type: CAZyme
Location: 9790 - 12984 (+)
Type: CAZyme
Location: 9790 - 12984 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.