Cluster: HRGMv2_2290_CGC48
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_01583
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_89 | HRGMv2_2290_89_9 | 7133 | 8944 | + | 3.A.16.1.2 |
| NULL(UNKNOWN) | HRGMv2_2290_89 | HRGMv2_2290_89_10 | 9059 | 9178 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2290_89 | HRGMv2_2290_89_11 | 9451 | 11325 | - | 3.A.1.120.6 |
| CAZyme | HRGMv2_2290_89 | HRGMv2_2290_89_12 | 12092 | 13573 | - | GH51_1 |
Gene ID: HRGMv2_2290_89_9
Type: TC
Location: 7133 - 8944 (+)
Type: TC
Location: 7133 - 8944 (+)
Gene ID: HRGMv2_2290_89_10
Type:
Location: 9059 - 9178 (+)
Type:
Location: 9059 - 9178 (+)
Gene ID: HRGMv2_2290_89_11
Type: TC
Location: 9451 - 11325 (-)
Type: TC
Location: 9451 - 11325 (-)
Gene ID: HRGMv2_2290_89_12
Type: CAZyme
Location: 12092 - 13573 (-)
Type: CAZyme
Location: 12092 - 13573 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.