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Cluster: HRGMv2_2290_CGC47

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_2290_88 HRGMv2_2290_88_1 86 511 - GT11
CAZyme HRGMv2_2290_88 HRGMv2_2290_88_2 544 2061 - GT2
NULL(UNKNOWN) HRGMv2_2290_88 HRGMv2_2290_88_3 2581 2694 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2290_88 HRGMv2_2290_88_4 2834 3970 - 3.B.1.1.5
pfam HRGMv2_2290_88 HRGMv2_2290_88_5 4287 8105 - DUF4450 | Bac_rhamnosid6H
TC HRGMv2_2290_88 HRGMv2_2290_88_6 8461 9699 - 2.A.39.1.1
NULL(UNKNOWN) HRGMv2_2290_88 HRGMv2_2290_88_7 9906 10994 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2290_88 HRGMv2_2290_88_8 11137 12486 - 9.B.34.1.2
TC HRGMv2_2290_88 HRGMv2_2290_88_9 12658 13392 - 3.A.1.3.14
Gene ID: HRGMv2_2290_88_1
Type: CAZyme
Location: 86 - 511 (-)
Gene ID: HRGMv2_2290_88_2
Type: CAZyme
Location: 544 - 2061 (-)
Gene ID: HRGMv2_2290_88_3
Type:
Location: 2581 - 2694 (-)
Gene ID: HRGMv2_2290_88_4
Type: TC
Location: 2834 - 3970 (-)
Gene ID: HRGMv2_2290_88_5
Type: pfam
Location: 4287 - 8105 (-)
Gene ID: HRGMv2_2290_88_6
Type: TC
Location: 8461 - 9699 (-)
Gene ID: HRGMv2_2290_88_7
Type:
Location: 9906 - 10994 (-)
Gene ID: HRGMv2_2290_88_8
Type: TC
Location: 11137 - 12486 (-)
Gene ID: HRGMv2_2290_88_9
Type: TC
Location: 12658 - 13392 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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