Cluster: HRGMv2_2290_CGC46
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00112
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_83 | HRGMv2_2290_83_3 | 2943 | 5660 | - | PL26 |
| TC | HRGMv2_2290_83 | HRGMv2_2290_83_4 | 6169 | 7791 | - | 3.A.1.1.9 |
| TC | HRGMv2_2290_83 | HRGMv2_2290_83_5 | 8046 | 8960 | - | 3.A.1.1.10 |
| TC | HRGMv2_2290_83 | HRGMv2_2290_83_6 | 8972 | 9940 | - | 3.A.1.1.29 |
Gene ID: HRGMv2_2290_83_3
Type: CAZyme
Location: 2943 - 5660 (-)
Type: CAZyme
Location: 2943 - 5660 (-)
Gene ID: HRGMv2_2290_83_4
Type: TC
Location: 6169 - 7791 (-)
Type: TC
Location: 6169 - 7791 (-)
Gene ID: HRGMv2_2290_83_5
Type: TC
Location: 8046 - 8960 (-)
Type: TC
Location: 8046 - 8960 (-)
Gene ID: HRGMv2_2290_83_6
Type: TC
Location: 8972 - 9940 (-)
Type: TC
Location: 8972 - 9940 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.