Cluster: HRGMv2_2290_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00541
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_81 | HRGMv2_2290_81_4 | 4488 | 7514 | - | GH38 |
| CAZyme | HRGMv2_2290_81 | HRGMv2_2290_81_5 | 7498 | 8553 | - | GH105 |
| NULL(UNKNOWN) | HRGMv2_2290_81 | HRGMv2_2290_81_6 | 8550 | 10418 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | HRGMv2_2290_81 | HRGMv2_2290_81_7 | 10664 | 12325 | - | SBP_bac_1 |
| TC | HRGMv2_2290_81 | HRGMv2_2290_81_8 | 12390 | 13262 | - | 3.A.1.1.10 |
| TC | HRGMv2_2290_81 | HRGMv2_2290_81_9 | 13309 | 14226 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2290_81_4
Type: CAZyme
Location: 4488 - 7514 (-)
Type: CAZyme
Location: 4488 - 7514 (-)
Gene ID: HRGMv2_2290_81_5
Type: CAZyme
Location: 7498 - 8553 (-)
Type: CAZyme
Location: 7498 - 8553 (-)
Gene ID: HRGMv2_2290_81_6
Type:
Location: 8550 - 10418 (-)
Type:
Location: 8550 - 10418 (-)
Gene ID: HRGMv2_2290_81_7
Type: STP
Location: 10664 - 12325 (-)
Type: STP
Location: 10664 - 12325 (-)
Gene ID: HRGMv2_2290_81_8
Type: TC
Location: 12390 - 13262 (-)
Type: TC
Location: 12390 - 13262 (-)
Gene ID: HRGMv2_2290_81_9
Type: TC
Location: 13309 - 14226 (-)
Type: TC
Location: 13309 - 14226 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.