Cluster: HRGMv2_2290_CGC40
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_02708
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_65 | HRGMv2_2290_65_8 | 7743 | 8693 | + | GH43_22 |
| pfam | HRGMv2_2290_65 | HRGMv2_2290_65_9 | 8801 | 9730 | + | BcrAD_BadFG |
| TC | HRGMv2_2290_65 | HRGMv2_2290_65_10 | 9810 | 11147 | - | 2.A.66.1.33 |
Gene ID: HRGMv2_2290_65_8
Type: CAZyme
Location: 7743 - 8693 (+)
Type: CAZyme
Location: 7743 - 8693 (+)
Gene ID: HRGMv2_2290_65_9
Type: pfam
Location: 8801 - 9730 (+)
Type: pfam
Location: 8801 - 9730 (+)
Gene ID: HRGMv2_2290_65_10
Type: TC
Location: 9810 - 11147 (-)
Type: TC
Location: 9810 - 11147 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.