Cluster: HRGMv2_2290_CGC39
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_06114
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_63 | HRGMv2_2290_63_10 | 13707 | 14450 | - | 3.A.1.4.6 |
| TF | HRGMv2_2290_63 | HRGMv2_2290_63_11 | 14691 | 15161 | + | Rrf2 |
| CAZyme | HRGMv2_2290_63 | HRGMv2_2290_63_12 | 15158 | 16588 | - | GH3 |
Gene ID: HRGMv2_2290_63_10
Type: TC
Location: 13707 - 14450 (-)
Type: TC
Location: 13707 - 14450 (-)
Gene ID: HRGMv2_2290_63_11
Type: TF
Location: 14691 - 15161 (+)
Type: TF
Location: 14691 - 15161 (+)
Gene ID: HRGMv2_2290_63_12
Type: CAZyme
Location: 15158 - 16588 (-)
Type: CAZyme
Location: 15158 - 16588 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.