Cluster: HRGMv2_2290_CGC38
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_61 | HRGMv2_2290_61_8 | 6702 | 7532 | - | 3.A.1.29.1 |
| TC | HRGMv2_2290_61 | HRGMv2_2290_61_9 | 7522 | 9246 | - | 3.A.1.29.1 |
| TC | HRGMv2_2290_61 | HRGMv2_2290_61_10 | 9437 | 9985 | - | 3.A.1.29.1 |
| CAZyme | HRGMv2_2290_61 | HRGMv2_2290_61_11 | 10510 | 12831 | + | CBM67 | GH78 |
| CAZyme | HRGMv2_2290_61 | HRGMv2_2290_61_12 | 12998 | 14101 | - | GT28 |
Gene ID: HRGMv2_2290_61_8
Type: TC
Location: 6702 - 7532 (-)
Type: TC
Location: 6702 - 7532 (-)
Gene ID: HRGMv2_2290_61_9
Type: TC
Location: 7522 - 9246 (-)
Type: TC
Location: 7522 - 9246 (-)
Gene ID: HRGMv2_2290_61_10
Type: TC
Location: 9437 - 9985 (-)
Type: TC
Location: 9437 - 9985 (-)
Gene ID: HRGMv2_2290_61_11
Type: CAZyme
Location: 10510 - 12831 (+)
Type: CAZyme
Location: 10510 - 12831 (+)
Gene ID: HRGMv2_2290_61_12
Type: CAZyme
Location: 12998 - 14101 (-)
Type: CAZyme
Location: 12998 - 14101 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.