Cluster: HRGMv2_2290_CGC36
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00918
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_55 | HRGMv2_2290_55_3 | 2455 | 3216 | + | 3.A.1.134.4 |
| TC | HRGMv2_2290_55 | HRGMv2_2290_55_4 | 3422 | 5482 | + | 3.A.1.134.4 |
| TF | HRGMv2_2290_55 | HRGMv2_2290_55_5 | 5464 | 6315 | - | HTH_AraC |
| CAZyme | HRGMv2_2290_55 | HRGMv2_2290_55_6 | 6643 | 8667 | + | GH127 |
Gene ID: HRGMv2_2290_55_3
Type: TC
Location: 2455 - 3216 (+)
Type: TC
Location: 2455 - 3216 (+)
Gene ID: HRGMv2_2290_55_4
Type: TC
Location: 3422 - 5482 (+)
Type: TC
Location: 3422 - 5482 (+)
Gene ID: HRGMv2_2290_55_5
Type: TF
Location: 5464 - 6315 (-)
Type: TF
Location: 5464 - 6315 (-)
Gene ID: HRGMv2_2290_55_6
Type: CAZyme
Location: 6643 - 8667 (+)
Type: CAZyme
Location: 6643 - 8667 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.