Cluster: HRGMv2_2290_CGC35
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00216
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_49 | HRGMv2_2290_49_2 | 1325 | 2680 | - | 2.A.66.1.33 |
| CAZyme | HRGMv2_2290_49 | HRGMv2_2290_49_3 | 2661 | 5459 | - | GH2 |
| CAZyme | HRGMv2_2290_49 | HRGMv2_2290_49_4 | 5602 | 7563 | - | GH78 |
| CAZyme | HRGMv2_2290_49 | HRGMv2_2290_49_5 | 7712 | 10321 | - | CBM67 | GH78 |
| CAZyme | HRGMv2_2290_49 | HRGMv2_2290_49_6 | 10405 | 12105 | - | GH5_46 |
| TC | HRGMv2_2290_49 | HRGMv2_2290_49_7 | 12147 | 13040 | - | 3.A.1.1.29 |
| TC | HRGMv2_2290_49 | HRGMv2_2290_49_8 | 13055 | 13996 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2290_49_2
Type: TC
Location: 1325 - 2680 (-)
Type: TC
Location: 1325 - 2680 (-)
Gene ID: HRGMv2_2290_49_3
Type: CAZyme
Location: 2661 - 5459 (-)
Type: CAZyme
Location: 2661 - 5459 (-)
Gene ID: HRGMv2_2290_49_4
Type: CAZyme
Location: 5602 - 7563 (-)
Type: CAZyme
Location: 5602 - 7563 (-)
Gene ID: HRGMv2_2290_49_5
Type: CAZyme
Location: 7712 - 10321 (-)
Type: CAZyme
Location: 7712 - 10321 (-)
Gene ID: HRGMv2_2290_49_6
Type: CAZyme
Location: 10405 - 12105 (-)
Type: CAZyme
Location: 10405 - 12105 (-)
Gene ID: HRGMv2_2290_49_7
Type: TC
Location: 12147 - 13040 (-)
Type: TC
Location: 12147 - 13040 (-)
Gene ID: HRGMv2_2290_49_8
Type: TC
Location: 13055 - 13996 (-)
Type: TC
Location: 13055 - 13996 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.