Cluster: HRGMv2_2290_CGC33
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_42 | HRGMv2_2290_42_3 | 2166 | 3074 | + | 3.A.1.1.11 |
| TC | HRGMv2_2290_42 | HRGMv2_2290_42_4 | 3110 | 3988 | + | 3.A.1.1.39 |
| CAZyme | HRGMv2_2290_42 | HRGMv2_2290_42_5 | 4092 | 5816 | + | GH110 |
| pfam | HRGMv2_2290_42 | HRGMv2_2290_42_6 | 6040 | 7560 | + | ADP_ribosyl_GH |
| CAZyme | HRGMv2_2290_42 | HRGMv2_2290_42_7 | 8045 | 9751 | + | GH28 |
Gene ID: HRGMv2_2290_42_3
Type: TC
Location: 2166 - 3074 (+)
Type: TC
Location: 2166 - 3074 (+)
Gene ID: HRGMv2_2290_42_4
Type: TC
Location: 3110 - 3988 (+)
Type: TC
Location: 3110 - 3988 (+)
Gene ID: HRGMv2_2290_42_5
Type: CAZyme
Location: 4092 - 5816 (+)
Type: CAZyme
Location: 4092 - 5816 (+)
Gene ID: HRGMv2_2290_42_6
Type: pfam
Location: 6040 - 7560 (+)
Type: pfam
Location: 6040 - 7560 (+)
Gene ID: HRGMv2_2290_42_7
Type: CAZyme
Location: 8045 - 9751 (+)
Type: CAZyme
Location: 8045 - 9751 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.