Cluster: HRGMv2_2290_CGC32
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_01103
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_38 | HRGMv2_2290_38_12 | 13603 | 15657 | - | GH42 |
| CAZyme | HRGMv2_2290_38 | HRGMv2_2290_38_13 | 15801 | 17636 | - | GH2 |
| TC | HRGMv2_2290_38 | HRGMv2_2290_38_14 | 17670 | 19487 | - | 3.A.1.106.2 |
Gene ID: HRGMv2_2290_38_12
Type: CAZyme
Location: 13603 - 15657 (-)
Type: CAZyme
Location: 13603 - 15657 (-)
Gene ID: HRGMv2_2290_38_13
Type: CAZyme
Location: 15801 - 17636 (-)
Type: CAZyme
Location: 15801 - 17636 (-)
Gene ID: HRGMv2_2290_38_14
Type: TC
Location: 17670 - 19487 (-)
Type: TC
Location: 17670 - 19487 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.