Cluster: HRGMv2_2290_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00642
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_32 | HRGMv2_2290_32_11 | 8945 | 9118 | - | 1.E.52.1.1 |
| pfam | HRGMv2_2290_32 | HRGMv2_2290_32_12 | 9170 | 10498 | - | T2SSF |
| pfam | HRGMv2_2290_32 | HRGMv2_2290_32_13 | 10501 | 11241 | - | T2SSF |
| TC | HRGMv2_2290_32 | HRGMv2_2290_32_14 | 11204 | 12427 | - | 3.A.7.18.1 |
| NULL(UNKNOWN) | HRGMv2_2290_32 | HRGMv2_2290_32_15 | 12424 | 13434 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_2290_32 | HRGMv2_2290_32_16 | 13431 | 13934 | - | Peptidase_A24 |
| CAZyme | HRGMv2_2290_32 | HRGMv2_2290_32_17 | 14463 | 16553 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_2290_32_11
Type: TC
Location: 8945 - 9118 (-)
Type: TC
Location: 8945 - 9118 (-)
Gene ID: HRGMv2_2290_32_12
Type: pfam
Location: 9170 - 10498 (-)
Type: pfam
Location: 9170 - 10498 (-)
Gene ID: HRGMv2_2290_32_13
Type: pfam
Location: 10501 - 11241 (-)
Type: pfam
Location: 10501 - 11241 (-)
Gene ID: HRGMv2_2290_32_14
Type: TC
Location: 11204 - 12427 (-)
Type: TC
Location: 11204 - 12427 (-)
Gene ID: HRGMv2_2290_32_15
Type:
Location: 12424 - 13434 (-)
Type:
Location: 12424 - 13434 (-)
Gene ID: HRGMv2_2290_32_16
Type: pfam
Location: 13431 - 13934 (-)
Type: pfam
Location: 13431 - 13934 (-)
Gene ID: HRGMv2_2290_32_17
Type: CAZyme
Location: 14463 - 16553 (-)
Type: CAZyme
Location: 14463 - 16553 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.