Cluster: HRGMv2_2290_CGC27
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00026
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_30 | HRGMv2_2290_30_8 | 10225 | 11685 | - | GH29 |
| pfam | HRGMv2_2290_30 | HRGMv2_2290_30_9 | 11670 | 13112 | - | SASA |
| CAZyme | HRGMv2_2290_30 | HRGMv2_2290_30_10 | 13109 | 16594 | - | GH106 |
| NULL(UNKNOWN) | HRGMv2_2290_30 | HRGMv2_2290_30_11 | 16702 | 18417 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2290_30 | HRGMv2_2290_30_12 | 18512 | 19417 | - | 3.A.1.1.29 |
| TC | HRGMv2_2290_30 | HRGMv2_2290_30_13 | 19428 | 20354 | - | 3.A.1.1.10 |
Gene ID: HRGMv2_2290_30_8
Type: CAZyme
Location: 10225 - 11685 (-)
Type: CAZyme
Location: 10225 - 11685 (-)
Gene ID: HRGMv2_2290_30_9
Type: pfam
Location: 11670 - 13112 (-)
Type: pfam
Location: 11670 - 13112 (-)
Gene ID: HRGMv2_2290_30_10
Type: CAZyme
Location: 13109 - 16594 (-)
Type: CAZyme
Location: 13109 - 16594 (-)
Gene ID: HRGMv2_2290_30_11
Type:
Location: 16702 - 18417 (-)
Type:
Location: 16702 - 18417 (-)
Gene ID: HRGMv2_2290_30_12
Type: TC
Location: 18512 - 19417 (-)
Type: TC
Location: 18512 - 19417 (-)
Gene ID: HRGMv2_2290_30_13
Type: TC
Location: 19428 - 20354 (-)
Type: TC
Location: 19428 - 20354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.