Cluster: HRGMv2_2290_CGC26
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_07410
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_29 | HRGMv2_2290_29_3 | 2223 | 3569 | - | GH32 |
| CAZyme | HRGMv2_2290_29 | HRGMv2_2290_29_4 | 3735 | 5762 | - | GH13_4 |
| TC | HRGMv2_2290_29 | HRGMv2_2290_29_5 | 5895 | 6752 | - | 3.A.1.1.45 |
| TC | HRGMv2_2290_29 | HRGMv2_2290_29_6 | 6752 | 7633 | - | 3.A.1.1.45 |
| STP | HRGMv2_2290_29 | HRGMv2_2290_29_7 | 7785 | 9053 | - | SBP_bac_1 |
| peptidase | HRGMv2_2290_29 | HRGMv2_2290_29_8 | 9387 | 10274 | - | G05.UPW |
| CAZyme | HRGMv2_2290_29 | HRGMv2_2290_29_9 | 10398 | 12326 | - | GH146 |
Gene ID: HRGMv2_2290_29_3
Type: CAZyme
Location: 2223 - 3569 (-)
Type: CAZyme
Location: 2223 - 3569 (-)
Gene ID: HRGMv2_2290_29_4
Type: CAZyme
Location: 3735 - 5762 (-)
Type: CAZyme
Location: 3735 - 5762 (-)
Gene ID: HRGMv2_2290_29_5
Type: TC
Location: 5895 - 6752 (-)
Type: TC
Location: 5895 - 6752 (-)
Gene ID: HRGMv2_2290_29_6
Type: TC
Location: 6752 - 7633 (-)
Type: TC
Location: 6752 - 7633 (-)
Gene ID: HRGMv2_2290_29_7
Type: STP
Location: 7785 - 9053 (-)
Type: STP
Location: 7785 - 9053 (-)
Gene ID: HRGMv2_2290_29_8
Type: peptidase
Location: 9387 - 10274 (-)
Type: peptidase
Location: 9387 - 10274 (-)
Gene ID: HRGMv2_2290_29_9
Type: CAZyme
Location: 10398 - 12326 (-)
Type: CAZyme
Location: 10398 - 12326 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.