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Cluster: HRGMv2_2290_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2290_26 HRGMv2_2290_26_1 108 1067 + 3.A.1.1.10
TC HRGMv2_2290_26 HRGMv2_2290_26_2 1091 2014 + 3.A.1.1.29
pfam HRGMv2_2290_26 HRGMv2_2290_26_3 2179 3852 + DUF3502
NULL(UNKNOWN) HRGMv2_2290_26 HRGMv2_2290_26_4 4098 4244 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_2290_26 HRGMv2_2290_26_5 4231 6009 + GH35
TF HRGMv2_2290_26 HRGMv2_2290_26_6 6028 6987 + HTH_AraC
CAZyme HRGMv2_2290_26 HRGMv2_2290_26_7 7176 7955 + CE12
TC HRGMv2_2290_26 HRGMv2_2290_26_8 7947 9329 - 2.A.66.1.25
CAZyme HRGMv2_2290_26 HRGMv2_2290_26_9 9442 11991 - GH2
Gene ID: HRGMv2_2290_26_1
Type: TC
Location: 108 - 1067 (+)
Gene ID: HRGMv2_2290_26_2
Type: TC
Location: 1091 - 2014 (+)
Gene ID: HRGMv2_2290_26_3
Type: pfam
Location: 2179 - 3852 (+)
Gene ID: HRGMv2_2290_26_4
Type:
Location: 4098 - 4244 (+)
Gene ID: HRGMv2_2290_26_5
Type: CAZyme
Location: 4231 - 6009 (+)
Gene ID: HRGMv2_2290_26_6
Type: TF
Location: 6028 - 6987 (+)
Gene ID: HRGMv2_2290_26_7
Type: CAZyme
Location: 7176 - 7955 (+)
Gene ID: HRGMv2_2290_26_8
Type: TC
Location: 7947 - 9329 (-)
Gene ID: HRGMv2_2290_26_9
Type: CAZyme
Location: 9442 - 11991 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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