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Cluster: HRGMv2_2290_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2290_22 HRGMv2_2290_22_6 4670 7177 + 3.A.3.23.2
CAZyme HRGMv2_2290_22 HRGMv2_2290_22_7 7197 8237 + CE19
CAZyme HRGMv2_2290_22 HRGMv2_2290_22_8 8296 11166 + GH106
NULL(UNKNOWN) HRGMv2_2290_22 HRGMv2_2290_22_9 11462 12217 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_2290_22 HRGMv2_2290_22_10 12735 14426 + 8.A.59.2.1
TF HRGMv2_2290_22 HRGMv2_2290_22_11 14429 16054 + HTH_AraC
TC HRGMv2_2290_22 HRGMv2_2290_22_12 16175 17986 + 3.A.1.1.9
TC HRGMv2_2290_22 HRGMv2_2290_22_13 18046 19017 + 3.A.1.1.9
TC HRGMv2_2290_22 HRGMv2_2290_22_14 19031 19915 + 3.A.1.1.9
Gene ID: HRGMv2_2290_22_6
Type: TC
Location: 4670 - 7177 (+)
Gene ID: HRGMv2_2290_22_7
Type: CAZyme
Location: 7197 - 8237 (+)
Gene ID: HRGMv2_2290_22_8
Type: CAZyme
Location: 8296 - 11166 (+)
Gene ID: HRGMv2_2290_22_9
Type:
Location: 11462 - 12217 (+)
Gene ID: HRGMv2_2290_22_10
Type: TC
Location: 12735 - 14426 (+)
Gene ID: HRGMv2_2290_22_11
Type: TF
Location: 14429 - 16054 (+)
Gene ID: HRGMv2_2290_22_12
Type: TC
Location: 16175 - 17986 (+)
Gene ID: HRGMv2_2290_22_13
Type: TC
Location: 18046 - 19017 (+)
Gene ID: HRGMv2_2290_22_14
Type: TC
Location: 19031 - 19915 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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