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Cluster: HRGMv2_2290_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2290_21 HRGMv2_2290_21_10 8897 10270 - 2.A.40.7.2
sulfatase HRGMv2_2290_21 HRGMv2_2290_21_11 10443 11951 - S1_27
CAZyme HRGMv2_2290_21 HRGMv2_2290_21_12 12059 14311 - GH95
CAZyme HRGMv2_2290_21 HRGMv2_2290_21_13 14286 16514 - GH95
TC HRGMv2_2290_21 HRGMv2_2290_21_14 16523 17371 - 3.A.1.1.34
TC HRGMv2_2290_21 HRGMv2_2290_21_15 17392 18291 - 3.A.1.1.11
STP HRGMv2_2290_21 HRGMv2_2290_21_16 18378 19805 - SBP_bac_1
TF HRGMv2_2290_21 HRGMv2_2290_21_17 20032 21501 - HTH_AraC
TC HRGMv2_2290_21 HRGMv2_2290_21_18 21476 23257 - 8.A.59.2.1
Gene ID: HRGMv2_2290_21_10
Type: TC
Location: 8897 - 10270 (-)
Gene ID: HRGMv2_2290_21_11
Type: sulfatase
Location: 10443 - 11951 (-)
Gene ID: HRGMv2_2290_21_12
Type: CAZyme
Location: 12059 - 14311 (-)
Gene ID: HRGMv2_2290_21_13
Type: CAZyme
Location: 14286 - 16514 (-)
Gene ID: HRGMv2_2290_21_14
Type: TC
Location: 16523 - 17371 (-)
Gene ID: HRGMv2_2290_21_15
Type: TC
Location: 17392 - 18291 (-)
Gene ID: HRGMv2_2290_21_16
Type: STP
Location: 18378 - 19805 (-)
Gene ID: HRGMv2_2290_21_17
Type: TF
Location: 20032 - 21501 (-)
Gene ID: HRGMv2_2290_21_18
Type: TC
Location: 21476 - 23257 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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