Cluster: HRGMv2_2290_CGC22
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00133
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_20 | HRGMv2_2290_20_8 | 13486 | 14604 | - | CE15 |
| STP | HRGMv2_2290_20 | HRGMv2_2290_20_9 | 14797 | 16596 | - | SBP_bac_1 |
| TC | HRGMv2_2290_20 | HRGMv2_2290_20_10 | 16832 | 18685 | - | 8.A.59.2.1 |
| TF | HRGMv2_2290_20 | HRGMv2_2290_20_11 | 18701 | 20023 | - | HTH_AraC | HTH_AraC |
| TC | HRGMv2_2290_20 | HRGMv2_2290_20_12 | 20153 | 21070 | - | 3.A.1.1.29 |
| TC | HRGMv2_2290_20 | HRGMv2_2290_20_13 | 21210 | 22160 | - | 3.A.1.1.29 |
| CAZyme | HRGMv2_2290_20 | HRGMv2_2290_20_14 | 22530 | 24758 | - | GH95 |
Gene ID: HRGMv2_2290_20_8
Type: CAZyme
Location: 13486 - 14604 (-)
Type: CAZyme
Location: 13486 - 14604 (-)
Gene ID: HRGMv2_2290_20_9
Type: STP
Location: 14797 - 16596 (-)
Type: STP
Location: 14797 - 16596 (-)
Gene ID: HRGMv2_2290_20_10
Type: TC
Location: 16832 - 18685 (-)
Type: TC
Location: 16832 - 18685 (-)
Gene ID: HRGMv2_2290_20_11
Type: TF
Location: 18701 - 20023 (-)
Type: TF
Location: 18701 - 20023 (-)
Gene ID: HRGMv2_2290_20_12
Type: TC
Location: 20153 - 21070 (-)
Type: TC
Location: 20153 - 21070 (-)
Gene ID: HRGMv2_2290_20_13
Type: TC
Location: 21210 - 22160 (-)
Type: TC
Location: 21210 - 22160 (-)
Gene ID: HRGMv2_2290_20_14
Type: CAZyme
Location: 22530 - 24758 (-)
Type: CAZyme
Location: 22530 - 24758 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.