Cluster: HRGMv2_2290_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00341
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_19 | HRGMv2_2290_19_2 | 582 | 2387 | - | 3.A.1.112.9 |
| pfam | HRGMv2_2290_19 | HRGMv2_2290_19_3 | 2350 | 3660 | - | PqqD |
| NULL(UNKNOWN) | HRGMv2_2290_19 | HRGMv2_2290_19_4 | 3756 | 4226 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_2290_19 | HRGMv2_2290_19_5 | 4340 | 5266 | - | GT2 |
Gene ID: HRGMv2_2290_19_2
Type: TC
Location: 582 - 2387 (-)
Type: TC
Location: 582 - 2387 (-)
Gene ID: HRGMv2_2290_19_3
Type: pfam
Location: 2350 - 3660 (-)
Type: pfam
Location: 2350 - 3660 (-)
Gene ID: HRGMv2_2290_19_4
Type:
Location: 3756 - 4226 (+)
Type:
Location: 3756 - 4226 (+)
Gene ID: HRGMv2_2290_19_5
Type: CAZyme
Location: 4340 - 5266 (-)
Type: CAZyme
Location: 4340 - 5266 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.