Cluster: HRGMv2_2290_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_06113
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_16 | HRGMv2_2290_16_15 | 19344 | 21242 | - | CE12 |
| CAZyme | HRGMv2_2290_16 | HRGMv2_2290_16_16 | 21266 | 23356 | - | GH35 |
| TC | HRGMv2_2290_16 | HRGMv2_2290_16_17 | 23610 | 26333 | - | 3.A.3.2.21 |
| TC | HRGMv2_2290_16 | HRGMv2_2290_16_18 | 26541 | 28463 | - | 3.A.1.135.5 |
| TC | HRGMv2_2290_16 | HRGMv2_2290_16_19 | 28463 | 30214 | - | 3.A.1.135.5 |
Gene ID: HRGMv2_2290_16_15
Type: CAZyme
Location: 19344 - 21242 (-)
Type: CAZyme
Location: 19344 - 21242 (-)
Gene ID: HRGMv2_2290_16_16
Type: CAZyme
Location: 21266 - 23356 (-)
Type: CAZyme
Location: 21266 - 23356 (-)
Gene ID: HRGMv2_2290_16_17
Type: TC
Location: 23610 - 26333 (-)
Type: TC
Location: 23610 - 26333 (-)
Gene ID: HRGMv2_2290_16_18
Type: TC
Location: 26541 - 28463 (-)
Type: TC
Location: 26541 - 28463 (-)
Gene ID: HRGMv2_2290_16_19
Type: TC
Location: 28463 - 30214 (-)
Type: TC
Location: 28463 - 30214 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.