Cluster: HRGMv2_2290_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_10 | HRGMv2_2290_10_18 | 21716 | 22249 | - | 9.B.156.3.1 |
| TC | HRGMv2_2290_10 | HRGMv2_2290_10_19 | 22250 | 23041 | - | 9.B.156.3.1 |
| CAZyme | HRGMv2_2290_10 | HRGMv2_2290_10_20 | 23311 | 24261 | - | GH159 |
| pfam | HRGMv2_2290_10 | HRGMv2_2290_10_21 | 24282 | 25427 | - | TelA |
| pfam | HRGMv2_2290_10 | HRGMv2_2290_10_22 | 25449 | 27035 | - | Halogen_Hydrol |
| TC | HRGMv2_2290_10 | HRGMv2_2290_10_23 | 27295 | 27942 | - | 2.A.115.1.2 |
Gene ID: HRGMv2_2290_10_18
Type: TC
Location: 21716 - 22249 (-)
Type: TC
Location: 21716 - 22249 (-)
Gene ID: HRGMv2_2290_10_19
Type: TC
Location: 22250 - 23041 (-)
Type: TC
Location: 22250 - 23041 (-)
Gene ID: HRGMv2_2290_10_20
Type: CAZyme
Location: 23311 - 24261 (-)
Type: CAZyme
Location: 23311 - 24261 (-)
Gene ID: HRGMv2_2290_10_21
Type: pfam
Location: 24282 - 25427 (-)
Type: pfam
Location: 24282 - 25427 (-)
Gene ID: HRGMv2_2290_10_22
Type: pfam
Location: 25449 - 27035 (-)
Type: pfam
Location: 25449 - 27035 (-)
Gene ID: HRGMv2_2290_10_23
Type: TC
Location: 27295 - 27942 (-)
Type: TC
Location: 27295 - 27942 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.