Cluster: HRGMv2_2290_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_00490
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2290_8 | HRGMv2_2290_8_14 | 14796 | 15830 | - | GT2 |
| TC | HRGMv2_2290_8 | HRGMv2_2290_8_15 | 15968 | 17713 | - | 3.A.1.106.15 |
| CAZyme | HRGMv2_2290_8 | HRGMv2_2290_8_16 | 17935 | 19023 | - | GT100 |
| NULL(UNKNOWN) | HRGMv2_2290_8 | HRGMv2_2290_8_17 | 19060 | 20508 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_2290_8 | HRGMv2_2290_8_18 | 20820 | 21674 | - | 9.B.142.3.8 |
Gene ID: HRGMv2_2290_8_14
Type: CAZyme
Location: 14796 - 15830 (-)
Type: CAZyme
Location: 14796 - 15830 (-)
Gene ID: HRGMv2_2290_8_15
Type: TC
Location: 15968 - 17713 (-)
Type: TC
Location: 15968 - 17713 (-)
Gene ID: HRGMv2_2290_8_16
Type: CAZyme
Location: 17935 - 19023 (-)
Type: CAZyme
Location: 17935 - 19023 (-)
Gene ID: HRGMv2_2290_8_17
Type:
Location: 19060 - 20508 (-)
Type:
Location: 19060 - 20508 (-)
Gene ID: HRGMv2_2290_8_18
Type: TC
Location: 20820 - 21674 (-)
Type: TC
Location: 20820 - 21674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.