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Cluster: HRGMv2_2290_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_2290_7 HRGMv2_2290_7_21 23759 25147 - 2.A.40.1.4
TC HRGMv2_2290_7 HRGMv2_2290_7_22 25436 27214 + 8.A.59.2.1
NULL(UNKNOWN) HRGMv2_2290_7 HRGMv2_2290_7_23 27211 27423 + NULL(UNKNOWN)
[View Structural Homologs]
TF HRGMv2_2290_7 HRGMv2_2290_7_24 27436 28884 + HTH_AraC | HTH_AraC
TC HRGMv2_2290_7 HRGMv2_2290_7_25 29075 30739 + 3.A.1.1.9
TC HRGMv2_2290_7 HRGMv2_2290_7_26 30847 31761 + 3.A.1.1.9
TC HRGMv2_2290_7 HRGMv2_2290_7_27 31786 32676 + 3.A.1.1.9
CAZyme HRGMv2_2290_7 HRGMv2_2290_7_28 32850 34373 + GH51_1
CAZyme HRGMv2_2290_7 HRGMv2_2290_7_29 34456 35562 + GH5_13
Gene ID: HRGMv2_2290_7_21
Type: TC
Location: 23759 - 25147 (-)
Gene ID: HRGMv2_2290_7_22
Type: TC
Location: 25436 - 27214 (+)
Gene ID: HRGMv2_2290_7_23
Type:
Location: 27211 - 27423 (+)
Gene ID: HRGMv2_2290_7_24
Type: TF
Location: 27436 - 28884 (+)
Gene ID: HRGMv2_2290_7_25
Type: TC
Location: 29075 - 30739 (+)
Gene ID: HRGMv2_2290_7_26
Type: TC
Location: 30847 - 31761 (+)
Gene ID: HRGMv2_2290_7_27
Type: TC
Location: 31786 - 32676 (+)
Gene ID: HRGMv2_2290_7_28
Type: CAZyme
Location: 32850 - 34373 (+)
Gene ID: HRGMv2_2290_7_29
Type: CAZyme
Location: 34456 - 35562 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Acetatifactor
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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