Cluster: HRGMv2_2290_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2290
- CGC Family ID: CGCFAM_01756
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2290_1 | HRGMv2_2290_1_51 | 55005 | 56795 | - | 1.A.11.2.7 |
| pfam | HRGMv2_2290_1 | HRGMv2_2290_1_52 | 56972 | 59071 | - | Gln-synt_C | GSIII_N | Gln-synt_C-ter |
| CAZyme | HRGMv2_2290_1 | HRGMv2_2290_1_53 | 59238 | 61415 | - | CBM67 | GH78 |
Gene ID: HRGMv2_2290_1_51
Type: TC
Location: 55005 - 56795 (-)
Type: TC
Location: 55005 - 56795 (-)
Gene ID: HRGMv2_2290_1_52
Type: pfam
Location: 56972 - 59071 (-)
Type: pfam
Location: 56972 - 59071 (-)
Gene ID: HRGMv2_2290_1_53
Type: CAZyme
Location: 59238 - 61415 (-)
Type: CAZyme
Location: 59238 - 61415 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Acetatifactor
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.