Cluster: HRGMv2_2285_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2285
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_2285_73 | HRGMv2_2285_73_1 | 3 | 2180 | - | PL1 |
| pfam | HRGMv2_2285_73 | HRGMv2_2285_73_2 | 2415 | 3590 | + | PucR | HTH_30 |
| TF | HRGMv2_2285_73 | HRGMv2_2285_73_3 | 3681 | 4694 | - | LacI |
| TC | HRGMv2_2285_73 | HRGMv2_2285_73_4 | 4856 | 5875 | + | 2.A.98.1.4 |
Gene ID: HRGMv2_2285_73_1
Type: CAZyme
Location: 3 - 2180 (-)
Type: CAZyme
Location: 3 - 2180 (-)
Gene ID: HRGMv2_2285_73_2
Type: pfam
Location: 2415 - 3590 (+)
Type: pfam
Location: 2415 - 3590 (+)
Gene ID: HRGMv2_2285_73_3
Type: TF
Location: 3681 - 4694 (-)
Type: TF
Location: 3681 - 4694 (-)
Gene ID: HRGMv2_2285_73_4
Type: TC
Location: 4856 - 5875 (+)
Type: TC
Location: 4856 - 5875 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.