Cluster: HRGMv2_2285_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2285
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2285_33 | HRGMv2_2285_33_6 | 6202 | 7257 | - | 3.A.1.132.1 |
| pfam | HRGMv2_2285_33 | HRGMv2_2285_33_7 | 7440 | 7742 | - | Transposase_20 |
| pfam | HRGMv2_2285_33 | HRGMv2_2285_33_8 | 8050 | 9000 | - | Rotamase_3 | SurA_N_2 |
| CAZyme | HRGMv2_2285_33 | HRGMv2_2285_33_9 | 9189 | 11249 | + | PL9 |
| TC | HRGMv2_2285_33 | HRGMv2_2285_33_10 | 11416 | 12840 | + | 2.A.35.2.1 |
Gene ID: HRGMv2_2285_33_6
Type: TC
Location: 6202 - 7257 (-)
Type: TC
Location: 6202 - 7257 (-)
Gene ID: HRGMv2_2285_33_7
Type: pfam
Location: 7440 - 7742 (-)
Type: pfam
Location: 7440 - 7742 (-)
Gene ID: HRGMv2_2285_33_8
Type: pfam
Location: 8050 - 9000 (-)
Type: pfam
Location: 8050 - 9000 (-)
Gene ID: HRGMv2_2285_33_9
Type: CAZyme
Location: 9189 - 11249 (+)
Type: CAZyme
Location: 9189 - 11249 (+)
Gene ID: HRGMv2_2285_33_10
Type: TC
Location: 11416 - 12840 (+)
Type: TC
Location: 11416 - 12840 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.