Cluster: HRGMv2_2285_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2285
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2285_25 | HRGMv2_2285_25_6 | 4231 | 4788 | + | 2.A.51.1.6 |
| TC | HRGMv2_2285_25 | HRGMv2_2285_25_7 | 4785 | 5351 | + | 2.A.51.1.6 |
| pfam | HRGMv2_2285_25 | HRGMv2_2285_25_8 | 5816 | 6361 | + | Ribosomal_S30AE | Ribosom_S30AE_C |
| CAZyme | HRGMv2_2285_25 | HRGMv2_2285_25_9 | 6701 | 12646 | + | CE12 | CE8 |
Gene ID: HRGMv2_2285_25_6
Type: TC
Location: 4231 - 4788 (+)
Type: TC
Location: 4231 - 4788 (+)
Gene ID: HRGMv2_2285_25_7
Type: TC
Location: 4785 - 5351 (+)
Type: TC
Location: 4785 - 5351 (+)
Gene ID: HRGMv2_2285_25_8
Type: pfam
Location: 5816 - 6361 (+)
Type: pfam
Location: 5816 - 6361 (+)
Gene ID: HRGMv2_2285_25_9
Type: CAZyme
Location: 6701 - 12646 (+)
Type: CAZyme
Location: 6701 - 12646 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.