Cluster: HRGMv2_2285_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_2285
- CGC Family ID: CGCFAM_00169
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_2285_186 | HRGMv2_2285_186_1 | 25 | 1167 | - | 2.A.67.4.2 |
| CAZyme | HRGMv2_2285_186 | HRGMv2_2285_186_2 | 1324 | 2283 | + | GT2 |
| pfam | HRGMv2_2285_186 | HRGMv2_2285_186_3 | 2280 | 2708 | + | GtrA_DPMS_TM |
| TC | HRGMv2_2285_186 | HRGMv2_2285_186_4 | 2721 | 4382 | + | 9.B.144.1.5 |
Gene ID: HRGMv2_2285_186_1
Type: TC
Location: 25 - 1167 (-)
Type: TC
Location: 25 - 1167 (-)
Gene ID: HRGMv2_2285_186_2
Type: CAZyme
Location: 1324 - 2283 (+)
Type: CAZyme
Location: 1324 - 2283 (+)
Gene ID: HRGMv2_2285_186_3
Type: pfam
Location: 2280 - 2708 (+)
Type: pfam
Location: 2280 - 2708 (+)
Gene ID: HRGMv2_2285_186_4
Type: TC
Location: 2721 - 4382 (+)
Type: TC
Location: 2721 - 4382 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
CAG-274
Genus
Gallispira
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.